Class: Subject

A subject is an entity being investigated in a study. This is a contextual entity. One and the same entity can be different subjects in two different studies.

URI: xyzri:Subject

classDiagram class Subject click Subject href "../Subject/" Thing <|-- Subject click Thing href "../Thing/" Subject <|-- XYZSubject click XYZSubject href "../XYZSubject/" Subject : about Subject --> "*" Thing : about click Thing href "../Thing/" Subject : annotations Subject --> "*" Annotation : annotations click Annotation href "../Annotation/" Subject : attributes Subject --> "*" AttributeSpecification : attributes click AttributeSpecification href "../AttributeSpecification/" Subject : broad_mappings Subject : characterized_by Subject --> "*" Statement : characterized_by click Statement href "../Statement/" Subject : close_mappings Subject : description Subject : display_label Subject : display_note Subject : editorial_notes Subject : exact_mappings Subject : identifiers Subject --> "*" Identifier : identifiers click Identifier href "../Identifier/" Subject : kind Subject --> "0..1" Thing : kind click Thing href "../Thing/" Subject : narrow_mappings Subject : pid Subject : related_mappings Subject : relations Subject --> "*" Thing : relations click Thing href "../Thing/" Subject : schema_type Subject : study Subject --> "0..1" Study : study click Study href "../Study/"

Inheritance

Thing [ ThingMixin]
- Subject
  - XYZSubject [ EntityMixin]

Slots

Name	Cardinality and Range	Description	Inheritance
study	0..1 Study	The study in which, for example, a subject was investigated	direct
pid	1 Uriorcurie	Persistent and globally unique identifier of a `Thing`	Thing
relations	* Thing	Declares an unqualified relation of the subject `Thing` to another `Thing`	Thing
about	* Thing	A relation of an information artifact to the subject, such as a URL identifyi...	ThingMixin
annotations	* Annotation	A record of properties of the metadata record on a subject, a collection of t...	ThingMixin
broad_mappings	* Uriorcurie	A list of terms from different schemas or terminology systems that have broad...	ThingMixin
close_mappings	* Uriorcurie	A list of terms from different schemas or terminology systems that have close...	ThingMixin
description	0..1 String	A free-text account of the subject	ThingMixin
display_label	0..1 String	Label that can be shown when the metadata record is displayed as an item	ThingMixin
display_note	0..1 String	Note that can be shown when the record is displayed as an item	ThingMixin
editorial_notes	* String	A comment about a metadata record either providing additional information for...	ThingMixin
exact_mappings	* Uriorcurie	A list of terms from different schemas or terminology systems that have ident...	ThingMixin
identifiers	* Identifier	An unambiguous reference to the subject within a given context	ThingMixin
kind	0..1 Thing	A classifier that identifies the nature/type of a subject	ThingMixin
attributes	* AttributeSpecification	Declares a relation that associates a `Thing` (or another attribute) with an ...	ThingMixin
characterized_by	* Statement	Qualifies relationships between a subject `Thing` and an object `Thing` with ...	ThingMixin
narrow_mappings	* Uriorcurie	A list of terms from different schemas or terminology systems that have narro...	ThingMixin
related_mappings	* Uriorcurie	A list of terms from different schemas or terminology systems that have relat...	ThingMixin
schema_type	0..1 NodeUriOrCurie	State that the subject is an instance of a particular schema class	ThingMixin

Identifier and Mapping Information

Schema Source

from schema: https://concepts.datalad.org/s/demo-research-information/unreleased

Mappings

Mapping Type	Mapped Value
self	xyzri:Subject
native	xyzri:Subject

LinkML Source

Direct

name: Subject
description: A subject is an entity being investigated in a study. This is a contextual
  entity. One and the same entity can be different subjects in two different studies.
from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
is_a: Thing
slots:
- study
slot_usage:
  study:
    name: study
    range: Study
  kind:
    name: kind
    description: A classifier that identifies the nature/type of a subject. For specimen
      (a subject derived/taken from another subject), this classifier should be more
      precise than the classifier of the source subject.
    title: Type

Induced

name: Subject
description: A subject is an entity being investigated in a study. This is a contextual
  entity. One and the same entity can be different subjects in two different studies.
from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
is_a: Thing
slot_usage:
  study:
    name: study
    range: Study
  kind:
    name: kind
    description: A classifier that identifies the nature/type of a subject. For specimen
      (a subject derived/taken from another subject), this classifier should be more
      precise than the classifier of the source subject.
    title: Type
attributes:
  study:
    name: study
    description: The study in which, for example, a subject was investigated.
    title: Study context
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    alias: study
    owner: Subject
    domain_of:
    - Subject
    range: Study
  pid:
    name: pid
    description: Persistent and globally unique identifier of a `Thing`.
    title: Persistent identifier
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - dcterms:identifier
    - schema:identifier
    rank: 1000
    identifier: true
    alias: pid
    owner: Subject
    domain_of:
    - Thing
    range: uriorcurie
    required: true
  relations:
    name: relations
    description: Declares an unqualified relation of the subject `Thing` to another
      `Thing`. This schema slot is used to define related things inline. If such a
      definition is not needed. A qualified relationship can be declared directly
      using the `characterized_by` slot.
    title: Relations
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - dcat:relation
    - dcterms:relation
    rank: 1000
    slot_uri: dlthings:relation
    alias: relations
    owner: Subject
    domain_of:
    - Thing
    symmetric: true
    relational_role: OBJECT
    range: Thing
    multivalued: true
    inlined: true
    inlined_as_list: false
  about:
    name: about
    description: A relation of an information artifact to the subject, such as a URL
      identifying the topic of a document.
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - schema:about
    - obo:IAO_0000136
    rank: 1000
    slot_uri: dcterms:subject
    alias: about
    owner: Subject
    domain_of:
    - ThingMixin
    range: Thing
    multivalued: true
  annotations:
    name: annotations
    description: A record of properties of the metadata record on a subject, a collection
      of tag/text tuples with the semantics of OWL Annotation.
    title: Annotations
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - obo:NCIT_C44272
    rank: 1000
    slot_uri: dlthings:annotations
    alias: annotations
    owner: Subject
    domain_of:
    - ThingMixin
    range: Annotation
    multivalued: true
    inlined: true
  broad_mappings:
    name: broad_mappings
    description: A list of terms from different schemas or terminology systems that
      have broader meaning.
    title: Broad mappings
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    is_a: mappings
    slot_uri: skos:broadMatch
    alias: broad_mappings
    owner: Subject
    domain_of:
    - ThingMixin
    range: uriorcurie
    multivalued: true
  close_mappings:
    name: close_mappings
    description: A list of terms from different schemas or terminology systems that
      have close meaning.
    title: Close mappings
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    is_a: mappings
    slot_uri: skos:closeMatch
    alias: close_mappings
    owner: Subject
    domain_of:
    - ThingMixin
    range: uriorcurie
    multivalued: true
  description:
    name: description
    annotations:
      dash:singleLine:
        tag: dash:singleLine
        value: false
    description: A free-text account of the subject.
    title: Description
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    close_mappings:
    - rdfs:comment
    broad_mappings:
    - obo:IAO_0000300
    rank: 1000
    slot_uri: dcterms:description
    alias: description
    owner: Subject
    domain_of:
    - ThingMixin
    range: string
  display_label:
    name: display_label
    description: Label that can be shown when the metadata record is displayed as
      an item.
    title: Record display label
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    slot_uri: skos:prefLabel
    alias: display_label
    owner: Subject
    domain_of:
    - ThingMixin
    range: string
  display_note:
    name: display_note
    annotations:
      dash:singleLine:
        tag: dash:singleLine
        value: false
    description: Note that can be shown when the record is displayed as an item. This
      is typically longer than a label.
    title: Record display note
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    slot_uri: skos:note
    alias: display_note
    owner: Subject
    domain_of:
    - ThingMixin
    range: string
  editorial_notes:
    name: editorial_notes
    annotations:
      dash:singleLine:
        tag: dash:singleLine
        value: false
    description: A comment about a metadata record either providing additional information
      for a record curation, or leaving a comment after curation occurred. This can
      be used to include information that is deemed relevant, but could not be expressed
      in the provided fields.
    title: Editorial note
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    slot_uri: skos:editorialNote
    alias: editorial_notes
    owner: Subject
    domain_of:
    - ThingMixin
    range: string
    multivalued: true
  exact_mappings:
    name: exact_mappings
    description: A list of terms from different schemas or terminology systems that
      have identical meaning.
    title: Exact mappings
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    is_a: mappings
    slot_uri: skos:exactMatch
    alias: exact_mappings
    owner: Subject
    domain_of:
    - ThingMixin
    range: uriorcurie
    multivalued: true
  identifiers:
    name: identifiers
    description: An unambiguous reference to the subject within a given context.
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - schema:identifier
    rank: 1000
    slot_uri: dcterms:identifier
    alias: identifiers
    owner: Subject
    domain_of:
    - ThingMixin
    range: Identifier
    multivalued: true
    inlined: true
    inlined_as_list: true
  kind:
    name: kind
    description: A classifier that identifies the nature/type of a subject. For specimen
      (a subject derived/taken from another subject), this classifier should be more
      precise than the classifier of the source subject.
    title: Type
    comments:
    - This is conceptually the same as an instance-level `broad_mappings`. It can
      make sense to use this slot (in addition) in order to enable straightforward
      type declarations for instances from a controlled, application specific vocabulary,
      while also keeping the ability to use `broad_mappings` for alignment with external
      vocabularies and applications.
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - dcterms:type
    rank: 1000
    slot_uri: dcterms:type
    alias: kind
    owner: Subject
    domain_of:
    - XYZPublicationVenue
    - ThingMixin
    range: Thing
  attributes:
    name: attributes
    description: Declares a relation that associates a `Thing` (or another attribute)
      with an attribute, where an attribute is an intrinsic characteristic, such as
      a quality, capability, disposition, function, or is an externally derived attribute
      determined from some descriptor (e.g. a quantity, position, label/identifier).
      Technically, this declaration is done via an `AttributeSpecification` that combines
      a `predicate` with a value declaration and the attribute-related slots of a
      `Thing`. Importantly, such attributes are declared inline, because they do not
      have a unique identifier. If an identifier is available, a `Thing` declaration
      (see `relation`), and a qualification of that relationship via a `Statement`
      (see `characterized_by`) should be preferred.
    title: Attributes
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - sio:SIO_000008
    rank: 1000
    slot_uri: dlthings:attributes
    alias: attributes
    owner: Subject
    domain_of:
    - ThingMixin
    range: AttributeSpecification
    multivalued: true
    inlined: true
    inlined_as_list: true
  characterized_by:
    name: characterized_by
    description: Qualifies relationships between a subject `Thing` and an object `Thing`
      with a `Statement` declaring a `predicate` on the nature of the relationship.
    title: Is characterized by
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - obo:RO_0000053
    rank: 1000
    slot_uri: dlthings:characterized_by
    alias: characterized_by
    owner: Subject
    domain_of:
    - ThingMixin
    range: Statement
    multivalued: true
    inlined: true
    inlined_as_list: true
  narrow_mappings:
    name: narrow_mappings
    description: A list of terms from different schemas or terminology systems that
      have narrower meaning.
    title: Narrow mappings
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    is_a: mappings
    slot_uri: skos:narrowMatch
    alias: narrow_mappings
    owner: Subject
    domain_of:
    - ThingMixin
    range: uriorcurie
    multivalued: true
  related_mappings:
    name: related_mappings
    description: A list of terms from different schemas or terminology systems that
      have related meaning.
    title: Related mappings
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    rank: 1000
    is_a: mappings
    slot_uri: skos:relatedMatch
    alias: related_mappings
    owner: Subject
    domain_of:
    - ThingMixin
    range: uriorcurie
    multivalued: true
  schema_type:
    name: schema_type
    description: State that the subject is an instance of a particular schema class.
      Typically, no explicit value needs to be assigned to this slot, because it matches
      the class type of a particular record. However, this slots can be used as a
      type designator of a schema element for validation and schema structure handling
      purposes. This is used to indicate specialized schema classes for properties
      that accept a hierarchy of classes as their range.
    from_schema: https://concepts.datalad.org/s/demo-research-information/unreleased
    exact_mappings:
    - dcterms:type
    rank: 1000
    slot_uri: rdf:type
    designates_type: true
    alias: schema_type
    owner: Subject
    domain_of:
    - ThingMixin
    - Identifier
    range: NodeUriOrCurie